Tags

Tags give the ability to mark specific points in history as being important

expert-tree-eunis-names

5095e1b0 · Label synthesised tree nodes with official EUNIS names · May 29, 2026

Label the reconstructed tree's synthesised group levels with official EUNIS names. Generic 'names' lookup arg + name_source provenance column on resy_expert_tree(); resy_eunis_names() ships the official EUNIS 2021 habitat names (EEA, bundled with provenance) so Q->Wetlands, Q1->Raised and blanket bogs, S->Heathland scrub and tundra, etc. Names render apart from expert descriptions (italic + EUNIS tag), no silent substitution. Structure cross-checked vs paper_hexgrids_2026 (EUNIS Level-1 = nine classes). --as-cran 0/0/0.

expert-tree-native-html

63ecccff · Render the expert hierarchy as native HTML; reconstruct group levels · May 29, 2026

Expert hierarchy as a self-contained native-HTML tree (collapsible <details>, in-page filter, zero JS dependencies) replacing the networkD3 widget, which rendered with broken layout when saved standalone. resy_expert_tree(fill=TRUE) reconstructs the implied group levels (Q11 -> Q1 -> Q) with the expert file as the authority: synthesised single-child wrappers it does not define are collapsed, so EUNIS-ESy roots at MA (not an invented M). Cross-checked vs EUNIS 2021/2022 online. --as-cran 0/0/0.

clean-check-0-0-0

033944ce · Reach a clean 0/0/0 check; rebuild the pkgdown reference index · May 29, 2026

R CMD check --as-cran now 0/0/0: named the 15 per-condition solver closures (cleared the codetools 'multiple FUN definitions' NOTE; classification output unchanged, 147 tests pass) and rebuilt the pkgdown reference index, which had gone stale against externalisation (referenced deleted GIS data objects) and missed the crosswalk + tree-viz + asset API. Added URL/BugReports to DESCRIPTION.

expert-tree-viz

42bd8818 · Add expert-system hierarchy tree and interactive viz · May 29, 2026

Expert-system hierarchy viz: resy_expert_tree() builds the classification tree from definition codes (longest-prefix nesting, honest on flat files); resy_view_expert() renders it as a collapsible D3 widget (networkD3, optional). Dependency-free core, --as-cran 0/0/1.

crosswalk-user-api

232bce11 · Add crosswalk user API and one-call keyed classification · May 29, 2026

Crosswalk user API + one-call keyed classification: resy_classify(by=) resolves name/GBIF/WFO/POWO/Euro+Med-keyed plot data through the crosswalk in one call (resolved -> canonical, unresolved passes through as unknown, taxon_resolution summary); plus resy_canonical_species/add_taxonomy_keys/summarize_taxa/crosswalk_coverage. --as-cran clean.

cran-clean-as-cran

71c7d549 · Make R CMD check --as-cran clean after externalisation · May 29, 2026
```
R CMD check --as-cran: 0 errors, 0 warnings, 1 pre-existing NOTE; tarball 1.15 MB
```

expert-example-externalise

ea020ef6 · Externalise the runtime expert, example data and round-trip corpus · May 29, 2026

Externalise runtime EUNIS expert + example data + round-trip corpus via the asset layer; remove unused EuroDEM docs; tarball 17 MB -> 1.15 MB (under CRAN ceiling)

drop-redundant-json

94fa7046 · Drop the redundant compiled expert.json (9.4 MB) · May 29, 2026

Remove the regenerable bundled EUNIS expert.json cache (9.4 MB); runtime resolves txt->rds only

roundtrip-zenodo-corpus

0f44a85e · Add round-trip floor against every official EUNIS-ESy Zenodo release · May 29, 2026

Round-trip fidelity verified byte-identical against all three official EUNIS-ESy Zenodo releases (2020-06-08, 2021-06-01, 2025-10-03)

gis-asset-externalise

55c2bc14 · Externalise GIS layers via the asset registry · May 29, 2026

Externalise GIS layers to the asset registry (configurable base URL); drop the resolution_1 orphan; License/NEWS CRAN fixes

asset-layer

b7690654 · Add externalised-asset layer: fetch-on-first-use, checksum-verified cache · May 27, 2026
```
Externalised-asset layer: fetch-on-first-use, checksum-verified rappdirs cache + registry
```

taxonomy-crosswalk

c5979471 · Add offline taxonomy crosswalk: resolve plot species to canonical ESy names · May 27, 2026

Offline taxonomy crosswalk: classify plots keyed by taxon name or GBIF/WFO/POWO/Euro+Med IDs without hand-harmonising names (additive; resy_read_crosswalk + resy_resolve_taxa).

nse-globalvars

fd7592b7 · Move and complete the NSE globalVariables declaration · May 27, 2026
```
Top-level, complete globalVariables() declaration for data.table NSE names
```
lint-safety-subset

5690f212 · Modernise correctness-adjacent idioms in solver/parser core · May 27, 2026
```
Correctness-adjacent lint fixes (seq_along, TRUE/FALSE, <-); NON block left for maintainers
```
dedup-tcover-operator-blocks

43d0fb4b · Wrap extracted helper signature to 80 cols · May 27, 2026
```
Collapse duplicated #T$ GR/GE blocks into one operator-parameterised helper
```
core-dead-code-purge

c7b0505f · Purge dead code from solver/parser core · May 27, 2026
```
Remove no-op diagnostics + orphaned id helpers; fix prefix-check message
```
solver-characterization-test

3ca28bc0 · Add characterisation test pinning solver output · May 27, 2026
```
Golden test pinning solver classifications before core cleanup
```

lossless-roundtrip

a008ba8a · Refine round-trip reader to S-tier: vectorise parsing, entries flag, validation · May 27, 2026

Lossless resy_read_expert/resy_write_expert: byte-identical round-trip across every bundled expert system (EUNIS + EuroVegChecklist, Meadow, Lemnetea, VegformMV). Vectorised parsing, optional entries view, validated inputs.

gis-orphan-purge

d9523068 · Remove orphaned GIS data layers; shrink package · May 27, 2026

Remove 28.9 MB of never-loaded GIS data (orphan coastline + duplicate dunes); installed size 76 -> 47 MB, tarball 47 -> 17 MB

release_v1.0

7e541b19 · Update Readme.md · Dec 22, 2020

This is the version used in 
Bruelheide et al. (2020) Implementing the formal language of the vegetation classification expert systems (ESy) in the statistical computing environment R. Applied Vegetation Science doi:10.1111/avsc.12562